WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54D1.3e Sequence Name  C54D1.3e
Length (nt)  3567   Chromosome Location  X: 7126651-7126865
Chromosome . Primary Identifier  X Chromosome Location . Start  7126651
Chromosome Location . End  7126865
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D1.3e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53282 IST-1, isoform e 134.3 1188 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00067650
WBRNAi00067727
WBRNAi00043128
WBRNAi00086881
WBRNAi00086875
WBRNAi00012377
WBRNAi00091042
WBRNAi00086873
WBRNAi00086872

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54D1.3e 7126651 7126865 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002163 ist-1 C54D1.3 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54D1.3e 7126651 7126865 1
CDS:C54D1.3e 7132152 7132336 1
CDS:C54D1.3e 7132891 7133123 1
CDS:C54D1.3e 7133536 7133673 1
CDS:C54D1.3e 7133732 7133906 1
CDS:C54D1.3e 7133949 7134072 1
CDS:C54D1.3e 7134127 7134244 1
CDS:C54D1.3e 7134302 7134489 1
CDS:C54D1.3e 7134541 7134552 1
CDS:C54D1.3e 7135249 7135479 1
CDS:C54D1.3e 7135529 7135582 1
CDS:C54D1.3e 7135779 7136000 1
CDS:C54D1.3e 7136051 7136189 1
CDS:C54D1.3e 7136240 7136440 1
CDS:C54D1.3e 7136880 7137124 1
CDS:C54D1.3e 7137174 7137335 1
CDS:C54D1.3e 7137385 7137866 1
CDS:C54D1.3e 7138777 7138921 1
CDS:C54D1.3e 7138973 7139270 1

1 Sequence

Length
3567

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54D1.3e.1 C54D1.3e.1 3567   X: 7126651-7139270