WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00096858 Phenotype Remark  RNAi resulted in defective chemotaxis to ammonium chloride (NH4Cl)
Remark  (Figure S7B) cmd-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H3.3a T21H3.3a 450   V: 1156308-1156341
CDS:T21H3.3b T21H3.3b 342   V: 1156697-1156861

1 Laboratories

Primary Identifier
GR

1 Phenotype

Identifier Name Description
WBPhenotype:0001435 ammonium chloride chemotaxis defective Failure in directed movement in response to ammonium chloride compared to control. In C. elegans, NH4Cl is an attractant. NH4Cl has also subsequently been used to assay for Cl- attraction in C. elegans.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040984

0 Strain