WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T21H3.3a Sequence Name  T21H3.3a
Length (nt)  450   Chromosome Location  V: 1156308-1156341
Chromosome . Primary Identifier  V Chromosome Location . Start  1156308
Chromosome Location . End  1156341
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21H3.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13902 CMD-1, isoform a 16.8 149 Caenorhabditis elegans
 

Other

38 RNAi

WormBase ID
WBRNAi00095736
WBRNAi00079119
WBRNAi00079120
WBRNAi00079153
WBRNAi00079846
WBRNAi00079847
WBRNAi00079124
WBRNAi00064154
WBRNAi00112228
WBRNAi00053763
WBRNAi00066709
WBRNAi00085714
WBRNAi00026351
WBRNAi00091028
WBRNAi00076695
WBRNAi00071873
WBRNAi00071515
WBRNAi00058284
WBRNAi00009204
WBRNAi00110581
WBRNAi00096864
WBRNAi00079134
WBRNAi00079148
WBRNAi00079130
WBRNAi00079140
WBRNAi00079143
WBRNAi00079145
WBRNAi00095850
WBRNAi00095927
WBRNAi00096002

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T21H3.3a 1156308 1156341 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T21H3.3a 1156308 1156341 1
CDS:T21H3.3a 1156623 1156861 1
CDS:T21H3.3a 1156959 1157106 1
CDS:T21H3.3a 1157164 1157192 1

1 Sequence

Length
450

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T21H3.3a.1 T21H3.3a.1 1484   V: 1156271-1158189