WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091674 Genotype  ccIs55 [sup-7(st5); unc-54::LacZ] V
Phenotype Remark  RNAi resulted in increased protein degradation in muscle cytosol, as indicated by reduced levels of staining of Beta-Galactosidase expressed from an unc-54::LacZ reporter transgene Remark  (Figure 1A) tln-1/Y71G12B.11 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006771 tln-1 Y71G12B.11 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12B.11a Y71G12B.11a 7662   I: 1721597-1721729
CDS:Y71G12B.11e Y71G12B.11e 6567   I: 1726686-1727126
CDS:Y71G12B.11c Y71G12B.11c 5673   I: 1729895-1730055
CDS:Y71G12B.11d Y71G12B.11d 4536   I: 1734592-1738527

1 Laboratories

Primary Identifier
CC

1 Phenotype

Identifier Name Description
WBPhenotype:0001645 protein degradation variant Variations in the chemical reactions and pathways resulting in the directed breakdown of a protein (via the destruction of its native, active configuration) compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040652

0 Strain