WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71G12B.11a Sequence Name  Y71G12B.11a
Length (nt)  7662   Chromosome Location  I: 1721597-1721729
Chromosome . Primary Identifier  I Chromosome Location . Start  1721597
Chromosome Location . End  1721729
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12B.11a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29914 TLN-1, isoform a 279.1 2553 Caenorhabditis elegans
 

Other

51 RNAi

WormBase ID
WBRNAi00063785
WBRNAi00026939
WBRNAi00026940
WBRNAi00026941
WBRNAi00026942
WBRNAi00026943
WBRNAi00026944
WBRNAi00001775
WBRNAi00058197
WBRNAi00109238
WBRNAi00004819
WBRNAi00116157
WBRNAi00065875
WBRNAi00091853
WBRNAi00091854
WBRNAi00099837
WBRNAi00100512
WBRNAi00094175
WBRNAi00004818
WBRNAi00071886
WBRNAi00109626
WBRNAi00100886
WBRNAi00071109
WBRNAi00099231
WBRNAi00099635
WBRNAi00099433
WBRNAi00080633
WBRNAi00114825
WBRNAi00022499
WBRNAi00117138

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71G12B.11a 1721597 1721729 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006771 tln-1 Y71G12B.11 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71G12B.11a 1721597 1721729 1
CDS:Y71G12B.11a 1721910 1722459 1
CDS:Y71G12B.11a 1725047 1725438 1
CDS:Y71G12B.11a 1726666 1727126 1
CDS:Y71G12B.11a 1728205 1728818 1
CDS:Y71G12B.11a 1730817 1731573 1
CDS:Y71G12B.11a 1733297 1733370 1
CDS:Y71G12B.11a 1734447 1738527 1
CDS:Y71G12B.11a 1738827 1739210 1
CDS:Y71G12B.11a 1740057 1740272 1

1 Sequence

Length
7662

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71G12B.11a.1 Y71G12B.11a.1 8087   I: 1721592-1740692