WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00108759 Genotype  ire-1(v33)
Phenotype Remark  "RNAi-mediated knockdown of these 35 genes identified 10 genes that caused intestinal degeneration in the ire-1(v33) mutant (Fig. 1A and Table 1)." Remark  (Table 1) rpl-1 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004412 rpl-10a Y71F9AL.13 Caenorhabditis elegans
WBGene00022117 Y71F9AL.12 Y71F9AL.12 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AL.12a Y71F9AL.12a 870   I: 2870608-2870631
CDS:Y71F9AL.13a Y71F9AL.13a 651   I: 2875431-2875601
CDS:Y71F9AL.12b Y71F9AL.12b 879   I: 2870608-2870631
CDS:Y71F9AL.12e Y71F9AL.12e 891   I: 2870608-2870631
CDS:Y71F9AL.12f Y71F9AL.12f 900   I: 2870608-2870631

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002428 intestinal degeneration Animals exhibit degeneration of the intestine, compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041065

0 Strain