WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71F9AL.12a Sequence Name  Y71F9AL.12a
Length (nt)  870   Chromosome Location  I: 2870608-2870631
Chromosome . Primary Identifier  I Chromosome Location . Start  2870608
Chromosome Location . End  2870631
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9AL.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45872 Y71F9AL.12, isoform a 32.2 289 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00096303
WBRNAi00095812
WBRNAi00095811
WBRNAi00058149
WBRNAi00026933
WBRNAi00026934
WBRNAi00004804
WBRNAi00064915
WBRNAi00004798
WBRNAi00108522
WBRNAi00095886
WBRNAi00095963
WBRNAi00096038
WBRNAi00096115
WBRNAi00096192
WBRNAi00096269
WBRNAi00096364
WBRNAi00096447
WBRNAi00096530
WBRNAi00096629
WBRNAi00108759
WBRNAi00108773

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71F9AL.12a 2870608 2870631 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022117 Y71F9AL.12 Y71F9AL.12 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71F9AL.12a 2870608 2870631 -1
CDS:Y71F9AL.12a 2871498 2871715 -1
CDS:Y71F9AL.12a 2872666 2872753 -1
CDS:Y71F9AL.12a 2873115 2873225 -1
CDS:Y71F9AL.12a 2874418 2874519 -1
CDS:Y71F9AL.12a 2874869 2875037 -1
CDS:Y71F9AL.12a 2875082 2875152 -1
CDS:Y71F9AL.12a 2875203 2875289 -1

1 Sequence

Length
870

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71F9AL.12a.1 Y71F9AL.12a.1 1337   I: 2870141-2875289