WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00108773 Genotype  zcIs4 [Phsp-4::GFP]
Phenotype Remark  "We assessed the effect of knockdown of these 10 genes on ER homeostasis by RNAi treatment in a zcIs4 transgenic strain harboring the hsp-4 promoter-driven GFP transgene that exhibits ER stress-dependent induction of GFP fluorescence." rpl-1 RNAi resulted in decreased expression of the Phsp-4::GFP transgene (Table 1) Remark  (Table 1) rpl-1 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004412 rpl-10a Y71F9AL.13 Caenorhabditis elegans
WBGene00022117 Y71F9AL.12 Y71F9AL.12 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AL.12a Y71F9AL.12a 870   I: 2870608-2870631
CDS:Y71F9AL.13a Y71F9AL.13a 651   I: 2875431-2875601
CDS:Y71F9AL.12b Y71F9AL.12b 879   I: 2870608-2870631
CDS:Y71F9AL.12e Y71F9AL.12e 891   I: 2870608-2870631
CDS:Y71F9AL.12f Y71F9AL.12f 900   I: 2870608-2870631

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041065

0 Strain