WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00117188 Genotype  baIn11[[Pdat-1:: -syn (human, wildtype), Pdat-1::GFP]; baIn33[Pdat-1::sid-1, Pmyo-2:: mCherry]; sid-1(pk3321); mir-2(gk259)
Phenotype Remark  enhanced a-syn-induced dopaminergic neurodegeneration (Figure 4) Remark  (Figure 4) sek-3 RNAi Ahringer clone
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022613 sek-3 ZC449.3 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC449.3a ZC449.3a 1116   X: 5018634-5018660
CDS:ZC449.3b ZC449.3b 1236   X: 5018018-5018040

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002380 neuron degeneration enhanced Neurons undergo a dramatic decrease in cell volume, collapse of the vacuoles and processes, and complete disintegration of the plasma membrane and most organelles at a faster rate or greater extent than those under conditions that elicit this response in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00064375

1 Strain

WormBase ID
WBStrain00052741