WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC449.3a Sequence Name  ZC449.3a
Length (nt)  1116   Chromosome Location  X: 5018634-5018660
Chromosome . Primary Identifier  X Chromosome Location . Start  5018634
Chromosome Location . End  5018660
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC449.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29622 SEK-3, isoform a 42.4 371 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00113194
WBRNAi00058927
WBRNAi00021702
WBRNAi00091038
WBRNAi00113158
WBRNAi00113105
WBRNAi00092593
WBRNAi00112964
WBRNAi00069280
WBRNAi00069281
WBRNAi00076002
WBRNAi00117188
WBRNAi00117187

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC449.3a 5018634 5018660 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022613 sek-3 ZC449.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC449.3a 5018634 5018660 1
CDS:ZC449.3a 5018716 5018819 1
CDS:ZC449.3a 5018875 5019043 1
CDS:ZC449.3a 5019090 5019227 1
CDS:ZC449.3a 5019277 5019396 1
CDS:ZC449.3a 5019511 5019562 1
CDS:ZC449.3a 5019619 5019746 1
CDS:ZC449.3a 5020227 5020447 1
CDS:ZC449.3a 5020501 5020657 1

1 Sequence

Length
1116

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC449.3a.2 ZC449.3a.2 1804   X: 5017891-5021098
Transcript:ZC449.3a.1 ZC449.3a.1 1440   X: 5018597-5020944