WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00099091 Genotype  ipla-1(xh13); wIs51[scm::GFP]
Phenotype Remark  vps-26 RNAi suppressed the aberrant seam cell alignment phenotype of the ipla-1(xh13) mutation Remark  (Table S1) vps-26/T20D3.7 RNAi. Authors state RNAi clones obtained from the Ahringer and Vidal laboratories, Ahringer clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006931 vps-26 T20D3.7 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20D3.7a T20D3.7a 1227   IV: 9339801-9340004
CDS:T20D3.7b T20D3.7b 1071   IV: 9339801-9340004
CDS:T20D3.7c T20D3.7c 1233   IV: 9339801-9340004
CDS:T20D3.7d T20D3.7d 1077   IV: 9339801-9340004

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002176 seam cell morphology variant Animals exhibit variations in the structure, organization or placement of the population of the lateral, alae-producing epithelial cells (seam cells), compared to that observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031898

0 Strain