WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T20D3.7a Sequence Name  T20D3.7a
Length (nt)  1227   Chromosome Location  IV: 9339801-9340004
Chromosome . Primary Identifier  IV Chromosome Location . Start  9339801
Chromosome Location . End  9340004
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20D3.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28684 VPS-26, isoform a 47.1 408 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00101722
WBRNAi00101723
WBRNAi00101726
WBRNAi00101725
WBRNAi00101728
WBRNAi00101727
WBRNAi00101742
WBRNAi00053616
WBRNAi00018904
WBRNAi00035703
WBRNAi00101724
WBRNAi00060738
WBRNAi00060739
WBRNAi00060740
WBRNAi00060741
WBRNAi00097726
WBRNAi00099091

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T20D3.7a 9339801 9340004 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006931 vps-26 T20D3.7 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T20D3.7a 9339801 9340004 -1
CDS:T20D3.7a 9340287 9340770 -1
CDS:T20D3.7a 9340847 9341003 -1
CDS:T20D3.7a 9341354 9341507 -1
CDS:T20D3.7a 9341563 9341790 -1

1 Sequence

Length
1227

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T20D3.7a.1 T20D3.7a.1 1628   IV: 9339400-9341790