WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077792 Genotype  N2
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors amplified by PCR from a C. elegans mixed stage cDNA library. Primer sequences are available from the author on request.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004466 rpn-10 B0205.3 Caenorhabditis elegans
WBGene00006734 ufd-2 T05H10.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0205.3 B0205.3 1041   I: 10730928-10731299
CDS:T05H10.5a T05H10.5a 2943   II: 8062752-8062808
CDS:T05H10.5c T05H10.5c 2940   II: 8062752-8062808
CDS:T05H10.5b T05H10.5b 2955   II: 8062752-8062808

0 Laboratories

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001024 male morphology variant Animals exhibit variations in the outcome of morphogenic processes required for formation or proper placement of sex-specific structures that distinguish the animal as a male in the population, from that observed for control males.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028730

0 Strain