WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110612 Genotype  mec-2::gfp
Phenotype Remark  All animals scored with the Mec phenotype after ldb-1 dsRNA-injection show little or no mec-2::gfp expression. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors do state that double-stranded RNA was synthesized from the clone yk391b9.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002261 ldb-1 F58A3.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.1c F58A3.1c 1890   X: 11028917-11029040
CDS:F58A3.1b F58A3.1b 1737   X: 11029715-11029803
CDS:F58A3.1a F58A3.1a 1779   X: 11037203-11037333

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004360

0 Strain