WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078845 Genotype  glr-3::ser-1RNAi
Phenotype Remark  RNAi knockdown of ser-1 expression in the RIA interneurons abolished 5-HT-dependent increases in aversive responses to dilute octanol (30 percent). Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004776 ser-1 F59C12.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59C12.2a F59C12.2a 2052   X: 16579745-16579808
CDS:F59C12.2b F59C12.2b 1908   X: 16582006-16582219

1 Laboratories

Primary Identifier
RWK

1 Phenotype

Identifier Name Description
WBPhenotype:0001452 octanol chemotaxis variant Any variation in the directed movement of a worm in response to a specific concentration gradient of octanol. In C. elegans, octanol is typically a repellant.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032881

0 Strain