WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00108375 Phenotype Remark  Increase in a-syn::GFP aggregation (strain UA50)
Remark  dnj-27 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001045 dnj-27 Y47H9C.5 Caenorhabditis elegans
WBGene00219231 mir-5545 Y47H9C.21 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47H9C.5b Y47H9C.5b 957   I: 11885032-11885561
CDS:Y47H9C.5a Y47H9C.5a 2367   I: 11877806-11877964

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001405 protein aggregation variant Variations that result in the accumulation of soluble/insoluble protein aggregates in a particular cell or tissue, compared to control. Protein aggregates are often formed by interactions between misfolded protein molecules and/or deficiencies in proper protein folding.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00042360

0 Strain