WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00117853 Phenotype Remark  Constitutive expression of chil-27 and several other ORR (Oomycete Recognition Response) genes.
Remark  skn-1 (WBGene00004804) RNAi; ORFeome Library clone
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004804 skn-1 T19E7.2 Caenorhabditis elegans
WBGene00020585 clec-178 T19E7.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19E7.2a T19E7.2a 1872   IV: 5651764-5651840
CDS:T19E7.2b T19E7.2b 933   IV: 5651764-5651840
CDS:T19E7.2c T19E7.2c 1602   IV: 5651764-5651840
CDS:T19E7.1 T19E7.1 537   IV: 5653987-5654142
CDS:T19E7.2d T19E7.2d 672   IV: 5651764-5651840

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002674 chil gene expression induction lacking infection Animals exhibit, in the absence of infection, induction of chil (chitinase-like) genes (e.g. chil-27), known immune response effectors in response to oomycete infection.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00066568

0 Strain