WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T19E7.2a Sequence Name  T19E7.2a
Length (nt)  1872   Chromosome Location  IV: 5651764-5651840
Chromosome . Primary Identifier  IV Chromosome Location . Start  5651764
Chromosome Location . End  5651840
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19E7.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27591 SKN-1, isoform a 70.7 623 Caenorhabditis elegans
 

Other

223 RNAi

WormBase ID
WBRNAi00083473
WBRNAi00083476
WBRNAi00116227
WBRNAi00081483
WBRNAi00084933
WBRNAi00084939
WBRNAi00106569
WBRNAi00106597
WBRNAi00103038
WBRNAi00103039
WBRNAi00113266
WBRNAi00098226
WBRNAi00092400
WBRNAi00067030
WBRNAi00000466
WBRNAi00053554
WBRNAi00053555
WBRNAi00084470
WBRNAi00059893
WBRNAi00059894
WBRNAi00089440
WBRNAi00089442
WBRNAi00089444
WBRNAi00089446
WBRNAi00072648
WBRNAi00073616
WBRNAi00073619
WBRNAi00102824
WBRNAi00102825
WBRNAi00065121

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T19E7.2a 5651764 5651840 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004804 skn-1 T19E7.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T19E7.2a 5651764 5651840 -1
CDS:T19E7.2a 5651893 5652260 -1
CDS:T19E7.2a 5652414 5652672 -1
CDS:T19E7.2a 5653349 5653501 -1
CDS:T19E7.2a 5653555 5653876 -1
CDS:T19E7.2a 5655183 5655607 -1
CDS:T19E7.2a 5655770 5655908 -1
CDS:T19E7.2a 5660256 5660384 -1

1 Sequence

Length
1872

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T19E7.2a.1 T19E7.2a.1 2597   IV: 5651039-5660384