WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00095482 Remark  (Table S1) C01H6.5 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003622 nhr-23 C01H6.5 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01H6.5a C01H6.5a 1767   I: 7216962-7217029
CDS:C01H6.5f C01H6.5f 1668   I: 7218823-7219177
CDS:C01H6.5b C01H6.5b 1662   I: 7218823-7219177
CDS:C01H6.5c C01H6.5c 1314   I: 7214967-7214973
CDS:C01H6.5d C01H6.5d 1320   I: 7214967-7214973
CDS:C01H6.5e C01H6.5e 1086   I: 7219631-7219696

1 Laboratories

Primary Identifier
GR

2 Phenotype

Identifier Name Description
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000402 avoids bacterial lawn Lawn avoidance refers to behavior in which animals initially enter the bacterial lawn but later exit and remain near the edge of the bacteria. Lawn avoidance is often a response to bacterial food, that is pathogenic or low quality to the animal.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040984

0 Strain