WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00107810 Phenotype Remark  "RNAi knockdown of unc-53 resulted in high frequency of defects (73% of unc-53(RNAi) (n = 52) that were phenotypically similar to defects caused by unc-73(RNAi) (Table 2D). Specifically, unc-53 (RNAi) treated animals exhibit a thick, truncated utse cell body (Figs 9H-I) and nuclei are linearly arranged (Figs 9G, I)."
Remark  (Figure 9) unc-53 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006788 unc-53 F45E10.1 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E10.1b F45E10.1b 4650   II: 11058332-11058555
CDS:F45E10.1h F45E10.1h 4629   II: 11058332-11058555
CDS:F45E10.1f F45E10.1f 4041   II: 11058332-11058555
CDS:F45E10.1g F45E10.1g 4842   II: 11058332-11058555
CDS:F45E10.1a F45E10.1a 4752   II: 11058332-11058555
CDS:F45E10.1c F45E10.1c 4965   II: 11058332-11058555
CDS:F45E10.1d F45E10.1d 4563   II: 11058332-11058555
CDS:F45E10.1e F45E10.1e 3705   II: 11058332-11058555

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000511 nuclear positioning variant Variations in the directed movement of the nucleus to a specific location within a cell compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00045833

0 Strain