WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00099005 Genotype  mom-4(ne19)
Phenotype Remark  apr-1(RNAi) in the mom-4(ne19) background led to 100 percent of animals lacking endoderm. In either of these backgrounds alone, the lack of endoderm is incomplete. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000156 apr-1 K04G2.8 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G2.8a K04G2.8a 3561   I: 8050043-8050225
CDS:K04G2.8b K04G2.8b 3567   I: 8050043-8050225
CDS:K04G2.8c K04G2.8c 2679   I: 8050043-8050225

1 Laboratories

Primary Identifier
WM

1 Phenotype

Identifier Name Description
WBPhenotype:0000472 endoderm absent Animals lack the early blast cells that give rise to the gut tissue (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00003656

0 Strain