WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K04G2.8a Sequence Name  K04G2.8a
Length (nt)  3561   Chromosome Location  I: 8050043-8050225
Chromosome . Primary Identifier  I Chromosome Location . Start  8050043
Chromosome Location . End  8050225
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04G2.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06102 APR-1, isoform a 131.7 1186 Caenorhabditis elegans
 

Other

104 RNAi

WormBase ID
WBRNAi00070925
WBRNAi00070927
WBRNAi00070928
WBRNAi00091584
WBRNAi00091593
WBRNAi00091592
WBRNAi00091595
WBRNAi00091594
WBRNAi00091598
WBRNAi00099004
WBRNAi00099005
WBRNAi00099031
WBRNAi00092550
WBRNAi00092551
WBRNAi00091565
WBRNAi00091581
WBRNAi00091580
WBRNAi00091596
WBRNAi00061053
WBRNAi00099029
WBRNAi00098995
WBRNAi00098425
WBRNAi00101814
WBRNAi00101815
WBRNAi00101358
WBRNAi00068229
WBRNAi00003922
WBRNAi00025869
WBRNAi00077292
WBRNAi00049941

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K04G2.8a 8050043 8050225 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000156 apr-1 K04G2.8 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:K04G2.8a 8050043 8050225 1
CDS:K04G2.8a 8050430 8050584 1
CDS:K04G2.8a 8050634 8051360 1
CDS:K04G2.8a 8051853 8052440 1
CDS:K04G2.8a 8052488 8054035 1
CDS:K04G2.8a 8054700 8054981 1
CDS:K04G2.8a 8055064 8055141 1

1 Sequence

Length
3561

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K04G2.8a.1 K04G2.8a.1 3901   I: 8050037-8055475