WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00103826 Genotype  xnIs96 [hmr-1p::HMR-1::GFP]
Phenotype Remark  HMR-1 localization was examined in embryos with hmp-2 RNAi-induced impairment of interactions between HMR-1 and F-actin. The embryos displayed aberrant basolateral accumulation of HMR-1::GFP, suggesting that mislocalization of sumoylated HMR-1 is the result of its dissociation from the actin cytoskeleton, which may affect both its apical recruitment and its stability at adherens junctions (AJ) (Figures 6A-6C; Figures S3A and S3B). Remark  (Figure 6) hmp-2 RNAi, feeding 1:1 dilution
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001979 hmp-2 K05C4.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05C4.6b K05C4.6b 2115   I: 14738882-14738937
CDS:K05C4.6a K05C4.6a 2037   I: 14739591-14739630

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000436 protein subcellular localization variant Any variation in the placement of a protein within in a cell or cellular compartment compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048594

1 Strain

WormBase ID
WBStrain00007535