WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K05C4.6b Sequence Name  K05C4.6b
Length (nt)  2115   Chromosome Location  I: 14738882-14738937
Chromosome . Primary Identifier  I Chromosome Location . Start  14738882
Chromosome Location . End  14738937
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05C4.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46780 HMP-2, isoform b 77.5 704 Caenorhabditis elegans
 

Other

63 RNAi

WormBase ID
WBRNAi00103826
WBRNAi00077353
WBRNAi00077676
WBRNAi00000077
WBRNAi00007609
WBRNAi00066925
WBRNAi00067031
WBRNAi00067043
WBRNAi00067415
WBRNAi00067544
WBRNAi00067564
WBRNAi00067710
WBRNAi00067887
WBRNAi00067916
WBRNAi00049977
WBRNAi00080644
WBRNAi00097721
WBRNAi00071850
WBRNAi00103831
WBRNAi00103852
WBRNAi00097723
WBRNAi00101460
WBRNAi00081406
WBRNAi00071087
WBRNAi00116669
WBRNAi00091281
WBRNAi00114765
WBRNAi00110440
WBRNAi00112566
WBRNAi00078943

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K05C4.6b 14738882 14738937 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001979 hmp-2 K05C4.6 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:K05C4.6b 14738882 14738937 1
CDS:K05C4.6b 14739569 14739630 1
CDS:K05C4.6b 14739688 14740350 1
CDS:K05C4.6b 14740458 14740622 1
CDS:K05C4.6b 14740963 14741954 1
CDS:K05C4.6b 14742346 14742522 1

1 Sequence

Length
2115

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K05C4.6b.1 K05C4.6b.1 2249   I: 14738882-14742656