WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078292 Genotype  HPL-2::GFP
Phenotype Remark  In wild-type embryos, hpl-2::GFP is concentrated in a median number of 15.4 foci per nucleus. trr-1 RNAi in these embryos increased the median number of foci per nucleus to 20.0.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007028 trr-1 C47D12.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47D12.1a C47D12.1a 12189   II: 11661800-11661982
CDS:C47D12.1c C47D12.1c 12156   II: 11661800-11661982
CDS:C47D12.1b C47D12.1b 12180   II: 11661800-11661973

1 Laboratories

Primary Identifier
PFR

1 Phenotype

Identifier Name Description
WBPhenotype:0000436 protein subcellular localization variant Any variation in the placement of a protein within in a cell or cellular compartment compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028369

0 Strain