WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084843 Genotype  nud-2(ok949)
Phenotype Remark  More nud-2(ok949);bicd-1 (RNAi) dorsal embryonics hyp7 nuclei failed to migrate when observed by DIC timelapse imaging as compared with nud-2(ok949) alone; 33.3% of nud-2(ok949);bicd-1(RNAi) nuclei failed to reach the opposite side of the embryo. Despite an increase in migration failure, nud-2(ok949);bicd-1 (RNAi) mutant nuclei started to migrate normally. Remark  Authors report (via another reference) using sequence corresponding to Exons 3-10 of 10 from the bicd-1 ORFeome clone; gene has 11 exons in current WormBase model (WS224); using exons 3-10 for curation

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016611 bicd-1 C43G2.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43G2.2b C43G2.2b 2175   IV: 6566229-6566348
CDS:C43G2.2a C43G2.2a 2214   IV: 6566229-6566348

1 Laboratories

Primary Identifier
UD

1 Phenotype

Identifier Name Description
WBPhenotype:0000511 nuclear positioning variant Variations in the directed movement of the nucleus to a specific location within a cell compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037662

0 Strain