WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00061181 Genotype  ten-1b::GFP, rrf-3(pk1426)
Phenotype Remark  Axonal pathfinding of some of the neurons was disturbed and they extended axons in the wrong direction and sometimes made loops and early turns.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006498 ten-1 R13F6.4 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13F6.4a R13F6.4a 7509   III: 6838544-6838706
CDS:R13F6.4d R13F6.4d 8055   III: 6830457-6830470
CDS:R13F6.4e R13F6.4e 8514   III: 6820935-6821025
CDS:R13F6.4f R13F6.4f 8292   III: 6823330-6823501

1 Laboratories

Primary Identifier
RU

4 Phenotype

Identifier Name Description
WBPhenotype:0000594 cell migration variant Any variation in the orderly movement of a cell from one site to another.
WBPhenotype:0000384 axon guidance variant Variations in the cue-directed extension of an axon towards a specific target site compared to control. (Axon guidance often depends on a combination of attractive and repulsive cues).
WBPhenotype:0000632 axon fasciculation variant The ability of axons to converge and form a bundle of nerve fibres (fascicle) is compromised.
WBPhenotype:0000516 ventral cord disorganized The longitudinal nerve cord of the midbody region, connecting the nerve ring and tail ganglia, is not arranged in the same manner as control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025239

0 Strain