WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00000316 Remark  yk174d10
Secondary Identifier  SA:yk174d10

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021533 Y42G9A.3 Y42G9A.3 Caenorhabditis elegans
WBGene00021535 wht-7 Y42G9A.6 Caenorhabditis elegans
WBGene00021532 Y42G9A.2 Y42G9A.2 Caenorhabditis elegans

11 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42G9A.6a Y42G9A.6a 2001   III: 6142123-6142295
CDS:Y42G9A.6f Y42G9A.6f 1911   III: 6142123-6142295
CDS:Y42G9A.6h Y42G9A.6h 1596   III: 6142123-6142301
CDS:Y42G9A.6d Y42G9A.6d 1962   III: 6142123-6142295
CDS:Y42G9A.6e Y42G9A.6e 1968   III: 6142123-6142301
CDS:Y42G9A.3a Y42G9A.3a 1128   III: 6146297-6146379
CDS:Y42G9A.2 Y42G9A.2 366   III: 6148198-6148296
CDS:Y42G9A.3b Y42G9A.3b 888   III: 6146297-6146379
CDS:Y42G9A.6b Y42G9A.6b 1590   III: 6142123-6142295
CDS:Y42G9A.6c Y42G9A.6c 2007   III: 6142123-6142301
CDS:Y42G9A.6g Y42G9A.6g 1917   III: 6142123-6142301

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain