WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y42G9A.6e Sequence Name  Y42G9A.6e
Length (nt)  1968   Chromosome Location  III: 6142123-6142301
Chromosome . Primary Identifier  III Chromosome Location . Start  6142123
Chromosome Location . End  6142301
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.6e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54405 WHT-7, isoform e 73.9 655 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00000316
WBRNAi00056432
WBRNAi00056434
WBRNAi00056439
WBRNAi00056440
WBRNAi00020514
WBRNAi00006897
WBRNAi00007111
WBRNAi00037024

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y42G9A.6e 6142123 6142301 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021535 wht-7 Y42G9A.6 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y42G9A.6e 6142123 6142301 -1
CDS:Y42G9A.6e 6142340 6142778 -1
CDS:Y42G9A.6e 6142828 6143129 -1
CDS:Y42G9A.6e 6143177 6143433 -1
CDS:Y42G9A.6e 6143807 6143976 -1
CDS:Y42G9A.6e 6144026 6144121 -1
CDS:Y42G9A.6e 6144169 6144351 -1
CDS:Y42G9A.6e 6149067 6149194 -1
CDS:Y42G9A.6e 6149238 6149346 -1
CDS:Y42G9A.6e 6149393 6149449 -1
CDS:Y42G9A.6e 6149499 6149546 -1

1 Sequence

Length
1968

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y42G9A.6e.1 Y42G9A.6e.1 1968   III: 6142123-6149546