WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00000806 Remark  yk249a4
Secondary Identifier  SA:yk249a4

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C3.3b F46C3.3b 3003   X: 11420743-11420823
CDS:F46C3.3c F46C3.3c 2892   X: 11420743-11420823
CDS:F46C3.3h F46C3.3h 3750   X: 11420743-11420823
CDS:F46C3.3d F46C3.3d 4128   X: 11420743-11420823
CDS:F46C3.3g F46C3.3g 4017   X: 11420743-11420823
CDS:F46C3.3a F46C3.3a 7734   X: 11420743-11420823
CDS:F46C3.3e F46C3.3e 3861   X: 11420743-11420823
CDS:F46C3.3f F46C3.3f 7623   X: 11420743-11420823

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain