WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F46C3.3c Sequence Name  F46C3.3c
Length (nt)  2892   Chromosome Location  X: 11420743-11420823
Chromosome . Primary Identifier  X Chromosome Location . Start  11420743
Chromosome Location . End  11420823
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C3.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44831 HUM-4, isoform c 111.0 963 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00000806
WBRNAi00114836

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F46C3.3c 11420743 11420823 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:F46C3.3c 11420743 11420823 -1
CDS:F46C3.3c 11421101 11421202 -1
CDS:F46C3.3c 11421273 11421439 -1
CDS:F46C3.3c 11421490 11421632 -1
CDS:F46C3.3c 11422050 11422189 -1
CDS:F46C3.3c 11422239 11422399 -1
CDS:F46C3.3c 11422446 11422620 -1
CDS:F46C3.3c 11422702 11422796 -1
CDS:F46C3.3c 11422862 11422995 -1
CDS:F46C3.3c 11423153 11423432 -1
CDS:F46C3.3c 11423485 11423593 -1
CDS:F46C3.3c 11423644 11423793 -1
CDS:F46C3.3c 11423847 11424099 -1
CDS:F46C3.3c 11424154 11424278 -1
CDS:F46C3.3c 11424878 11424996 -1
CDS:F46C3.3c 11425042 11425278 -1
CDS:F46C3.3c 11425328 11425448 -1
CDS:F46C3.3c 11425682 11425855 -1
CDS:F46C3.3c 11425904 11426029 -1

1 Sequence

Length
2892

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F46C3.3c.1 F46C3.3c.1 7962   X: 11420465-11433585
Transcript:F46C3.3c.2 F46C3.3c.2 8619   X: 11420465-11433585
Transcript:F46C3.3c.4 F46C3.3c.4 4089   X: 11420474-11428220
Transcript:F46C3.3c.3 F46C3.3c.3 4321   X: 11420474-11428634