WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00066736 Genotype  rrf-3(pk1426)
Phenotype Remark  few worms

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000376 ccr-4 ZC518.3 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC518.3a ZC518.3a 1821   IV: 12362062-12362081
CDS:ZC518.3d ZC518.3d 2034   IV: 12365545-12366340
CDS:ZC518.3e ZC518.3e 1203   IV: 12368430-12368463
CDS:ZC518.3b ZC518.3b 1842   IV: 12361654-12361694
CDS:ZC518.3c ZC518.3c 1794   IV: 12363046-12363238

1 Laboratories

Primary Identifier
AQ

5 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000032 sick Animals exhibit some combination of abnormal features relating to size, movement, body integrity, pigmentation, viability, fertility etc.
WBPhenotype:0000229 small Animals are shorter and thinner than control animals at the same developmental stage.
WBPhenotype:0000645 roller The body of the animal rotates around its long axis as the animal moves, causing the animal to move in a circular pattern. In liquid media, wave propogation is helical rather than planar.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026635

0 Strain