WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC518.3a Sequence Name  ZC518.3a
Length (nt)  1821   Chromosome Location  IV: 12362062-12362081
Chromosome . Primary Identifier  IV Chromosome Location . Start  12362062
Chromosome Location . End  12362081
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC518.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31743 CCR-4, isoform a 68.6 606 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00070528
WBRNAi00059000
WBRNAi00066736
WBRNAi00021747
WBRNAi00027018
WBRNAi00027019
WBRNAi00094026
WBRNAi00113547
WBRNAi00027553
WBRNAi00064351
WBRNAi00088605
WBRNAi00088712
WBRNAi00070526
WBRNAi00070525
WBRNAi00070527
WBRNAi00066549
WBRNAi00117560
WBRNAi00117559

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC518.3a 12362062 12362081 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000376 ccr-4 ZC518.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC518.3a 12362062 12362081 1
CDS:ZC518.3a 12363039 12363238 1
CDS:ZC518.3a 12363287 12363390 1
CDS:ZC518.3a 12363877 12364135 1
CDS:ZC518.3a 12368395 12368463 1
CDS:ZC518.3a 12368784 12369248 1
CDS:ZC518.3a 12369298 12369825 1
CDS:ZC518.3a 12370451 12370626 1

1 Sequence

Length
1821

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC518.3a.1 ZC518.3a.1 3157   IV: 12361952-12371852