WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00026864 Genotype  NL4256 rrf-3(pk1426)
Phenotype Remark  %lethal range Secondary Identifier  Simmer:Y55F3A_750.e

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000113 alh-7 F45H10.1 Caenorhabditis elegans
WBGene00000816 csn-4 Y55F3AM.15 Caenorhabditis elegans
WBGene00021934 cct-8 Y55F3AR.3 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.15 Y55F3AM.15 1239   IV: 1077915-1078115
CDS:Y55F3AR.3a Y55F3AR.3a 1647   IV: 1087812-1088002
CDS:Y55F3AR.3b Y55F3AR.3b 1284   IV: 1087812-1088002

1 Laboratories

Primary Identifier
NL

3 Phenotype

Identifier Name Description
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006395

0 Strain