WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55F3AM.15 Sequence Name  Y55F3AM.15
Length (nt)  1239   Chromosome Location  IV: 1077915-1078115
Chromosome . Primary Identifier  IV Chromosome Location . Start  1077915
Chromosome Location . End  1078115
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.15

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25482 CSN-4 46.1 412 Caenorhabditis elegans
 

Other

29 RNAi

WormBase ID
WBRNAi00026864
WBRNAi00075049
WBRNAi00075048
WBRNAi00075050
WBRNAi00075053
WBRNAi00075052
WBRNAi00072758
WBRNAi00021026
WBRNAi00088179
WBRNAi00088302
WBRNAi00063409
WBRNAi00057526
WBRNAi00063403
WBRNAi00037517
WBRNAi00072759
WBRNAi00072760
WBRNAi00075047
WBRNAi00061516
WBRNAi00075051
WBRNAi00075054
WBRNAi00088046
WBRNAi00088087
WBRNAi00088138
WBRNAi00088220
WBRNAi00088261
WBRNAi00088343
WBRNAi00088384
WBRNAi00088437
WBRNAi00084279

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AM.15 1077915 1078115 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000816 csn-4 Y55F3AM.15 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AM.15 1077915 1078115 -1
CDS:Y55F3AM.15 1080387 1080799 -1
CDS:Y55F3AM.15 1082736 1083033 -1
CDS:Y55F3AM.15 1084608 1084768 -1
CDS:Y55F3AM.15 1086224 1086309 -1
CDS:Y55F3AM.15 1086928 1087007 -1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55F3AM.15.1 Y55F3AM.15.1 1697   IV: 1077463-1087013