WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078010 Phenotype Remark  Tissues of tat-5(RNAi) embryos exhibit extensive necrotic cell death (data not shown).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013034 tat-1 Y49E10.11 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.11a Y49E10.11a 3420   III: 12399363-12399460
CDS:Y49E10.11b Y49E10.11b 3270   III: 12404132-12404204
CDS:Y49E10.11c Y49E10.11c 3579   III: 12401682-12402063

0 Laboratories

3 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0001397 necrotic cell death increased Animals exhibit an increase in the cell death process that is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents, compared to control.
WBPhenotype:0000694 hermaphrodite sterile Hermaphrodites fail to generate viable self-progeny and/or cross-progeny.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032240

1 Strain

WormBase ID
WBStrain00000001