WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00072668 Phenotype Remark  RNAi phenotype in lin-35(n2239) worms was reproducibly stronger than those observed in WT (primary screen) and rrf-3(pk1426) (secondary screen) animals. Phenotype was observed in F1 generation.
Remark  candidate lin-35 interacting gene based on results of the secondary screen
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003025 lin-40 T27C4.4 Caenorhabditis elegans
WBGene00220102 T27C4.7 T27C4.7 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27C4.4d T27C4.4d 2613   V: 3705012-3705140
CDS:T27C4.4e T27C4.4e 2208   V: 3705545-3707395
CDS:T27C4.4a T27C4.4a 3069   V: 3705012-3705140
CDS:T27C4.4b T27C4.4b 2613   V: 3705012-3705140

1 Laboratories

Primary Identifier
SV

1 Phenotype

Identifier Name Description
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

1 Strain

WormBase ID
WBStrain00000001