WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27C4.4d Sequence Name  T27C4.4d
Length (nt)  2613   Chromosome Location  V: 3705012-3705140
Chromosome . Primary Identifier  V Chromosome Location . Start  3705012
Chromosome Location . End  3705140
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27C4.4d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33331 LIN-40, isoform d 96.5 870 Caenorhabditis elegans
 

Other

107 RNAi

WormBase ID
WBRNAi00065540
WBRNAi00070516
WBRNAi00065541
WBRNAi00065542
WBRNAi00065544
WBRNAi00086385
WBRNAi00086388
WBRNAi00086389
WBRNAi00066936
WBRNAi00067098
WBRNAi00067726
WBRNAi00067817
WBRNAi00068072
WBRNAi00068194
WBRNAi00115854
WBRNAi00064513
WBRNAi00064711
WBRNAi00064800
WBRNAi00064826
WBRNAi00072667
WBRNAi00009227
WBRNAi00026414
WBRNAi00072668
WBRNAi00074813
WBRNAi00064680
WBRNAi00074810
WBRNAi00097187
WBRNAi00072669
WBRNAi00074812
WBRNAi00069950

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27C4.4d 3705012 3705140 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003025 lin-40 T27C4.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27C4.4d 3705012 3705140 1
CDS:T27C4.4d 3705208 3705316 1
CDS:T27C4.4d 3705378 3707395 1
CDS:T27C4.4d 3708031 3708187 1
CDS:T27C4.4d 3708901 3709013 1
CDS:T27C4.4d 3710038 3710124 1

1 Sequence

Length
2613

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27C4.4d.1 T27C4.4d.1 3962   V: 3704988-3712793