WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064612 Remark  Genetic enhancer interactions are identified by comparing RNAi phenotypes of library genes in wild-type animals with those seen in mutant worms carrying a defined lesion in a single query gene; a genetic interaction between a query gene and a library gene is observed if the phenotype of the combined perturbation is greater than the sum of the two individual perturbations.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001876 his-2 T10C6.13 Caenorhabditis elegans
WBGene00001880 his-6 F45F2.13 Caenorhabditis elegans
WBGene00001914 his-40 K03A1.1 Caenorhabditis elegans
WBGene00001923 his-49 F07B7.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07B7.5 F07B7.5 411   V: 8847943-8848353
CDS:F45F2.13 F45F2.13 411   V: 8534567-8534977
CDS:K03A1.1 K03A1.1 411   X: 7310110-7310520
CDS:T10C6.13 T10C6.13 411   V: 16041873-16042283

1 Laboratories

Primary Identifier
ANF

1 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027756

1 Strain

WormBase ID
WBStrain00026716