WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086823 Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors mentioned that full-length cDNA was used. Both injection and feeding led to the same phenotype.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

7 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001883 his-9 ZK131.3 Caenorhabditis elegans
WBGene00001884 his-10 ZK131.4 Caenorhabditis elegans
WBGene00001887 his-13 ZK131.7 Caenorhabditis elegans
WBGene00001888 his-14 ZK131.8 Caenorhabditis elegans
WBGene00001899 his-25 ZK131.2 Caenorhabditis elegans
WBGene00001900 his-26 ZK131.1 Caenorhabditis elegans
WBGene00001916 his-42 F08G2.3 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK131.4 ZK131.4 312   II: 13823064-13823375
CDS:ZK131.1 ZK131.1 312   II: 13825532-13825843
CDS:F08G2.3 F08G2.3 411   II: 13828287-13828697
CDS:ZK131.2 ZK131.2 411   II: 13824849-13825259
CDS:ZK131.3 ZK131.3 411   II: 13823648-13824058
CDS:ZK131.7 ZK131.7 411   II: 13820210-13820620
CDS:ZK131.8 ZK131.8 312   II: 13819626-13819937

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000361 lima bean arrest Cessation of development at an intermediate stage in embryogenesis, immediately following the completion of gastrulation. In C. elegans this occurs around 350-390 minutes after first cleavage, cell number is at approximately 560 cells. At this time cell proliferation ceases and the embryo begins morphogenesis and elongation. The shape of the entire embryo within the eggshell resembles a lima bean (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005142

0 Strain