WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00018412 Secondary Identifier  JA:T07H8.4

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans

9 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4d T07H8.4d 5988   V: 6956638-6956778
CDS:T07H8.4i T07H8.4i 2865   V: 6956638-6956778
CDS:T07H8.4c T07H8.4c 3504   V: 6956638-6956778
CDS:T07H8.4b T07H8.4b 5058   V: 6956638-6956778
CDS:T07H8.4e T07H8.4e 5865   V: 6957078-6957398
CDS:T07H8.4a T07H8.4a 6024   V: 6956638-6956778
CDS:T07H8.4f T07H8.4f 5457   V: 6957565-6957601
CDS:T07H8.4g T07H8.4g 4815   V: 6958798-6959517
CDS:T07H8.4h T07H8.4h 6021   V: 6956638-6956778

1 Laboratories

Primary Identifier
JA

0 Phenotype

8 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005654

0 Strain