WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07H8.4d Sequence Name  T07H8.4d
Length (nt)  5988   Chromosome Location  V: 6956638-6956778
Chromosome . Primary Identifier  V Chromosome Location . Start  6956638
Chromosome Location . End  6956778
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47967 MEC-1, isoform d 227.0 1995 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052813
WBRNAi00018412
WBRNAi00089153
WBRNAi00103515

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07H8.4d 6956638 6956778 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans

30 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07H8.4d 6956638 6956778 1
CDS:T07H8.4d 6957029 6957117 1
CDS:T07H8.4d 6957173 6957398 1
CDS:T07H8.4d 6957490 6957601 1
CDS:T07H8.4d 6957769 6957964 1
CDS:T07H8.4d 6958249 6958339 1
CDS:T07H8.4d 6958388 6958508 1
CDS:T07H8.4d 6958557 6958769 1
CDS:T07H8.4d 6958814 6959517 1
CDS:T07H8.4d 6959572 6959695 1
CDS:T07H8.4d 6959741 6959872 1
CDS:T07H8.4d 6959917 6960059 1
CDS:T07H8.4d 6960105 6960503 1
CDS:T07H8.4d 6960550 6961284 1
CDS:T07H8.4d 6961365 6961419 1
CDS:T07H8.4d 6961473 6961579 1
CDS:T07H8.4d 6961658 6961787 1
CDS:T07H8.4d 6961832 6961901 1
CDS:T07H8.4d 6961970 6962106 1
CDS:T07H8.4d 6962156 6962356 1
CDS:T07H8.4d 6962406 6962609 1
CDS:T07H8.4d 6962683 6962762 1
CDS:T07H8.4d 6962818 6963008 1
CDS:T07H8.4d 6963056 6963297 1
CDS:T07H8.4d 6964646 6964783 1
CDS:T07H8.4d 6965152 6965346 1
CDS:T07H8.4d 6965392 6965722 1
CDS:T07H8.4d 6965775 6965842 1
CDS:T07H8.4d 6965890 6966013 1
CDS:T07H8.4d 6966064 6966352 1

1 Sequence

Length
5988

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07H8.4d.1 T07H8.4d.1 6090   V: 6956537-6966401
Transcript:T07H8.4d.2 T07H8.4d.2 5989   V: 6956637-6966352