WormMine: RNAi WBRNAi00097851

• WormBase ID: WBRNAi00097851
• Genotype: opIs334 [Pced-1::YFP::2xFYVE] (marker for phostphatidylinositol-3-phosphate (PtdIns(3)P))
• Phenotype Remark: RNAi resulted in an accumulation of YFP::2xFYVE halos in phagosomes engulfing apoptotic cell corpses, suggesting a defect/arrest in phagosome maturation at the FYVE(+) stage
• Remark: (Figure 2m, Table S1d) vps-39 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Data Sets

• WormBaseAcedbConverter

1 Inhibits Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00011625	vps-39	T08G5.5	Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:T08G5.5a	T08G5.5a	2772	V: 14034593-14034805
CDS:T08G5.5b	T08G5.5b	2781	V: 14034593-14034805
CDS:T08G5.5d	T08G5.5d	2772	V: 14034593-14034805
CDS:T08G5.5c	T08G5.5c	2763	V: 14034593-14034805

0 Laboratories

2 Phenotype

Identifier	Name	Description
WBPhenotype:0000679	transgene subcellular localization variant	Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001846	phagosome maturation defective	Early phagosomes fail to undergo the maturation process following the ingestion of particulate material by phagocytosis; During maturation, phagosomes acquire markers of late endosomes and lysosomes.

0 Phenotype _ Not _ Observed

1 Reference

First Author	Title	Year	Journal	Volume	Pages	PubMed ID
						WBPaper00036059

0 Strain