WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098241 Genotype  rad-54(ok615); RPA-1::YFP
Phenotype Remark  spo-11 RNAi suppressed the increased number of RPA-1::YFP foci formed in mid-to-late pachytene germ cells in rad-54(ok615) mutants Remark  (Figure 2e) spo-11 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004985 spo-11 T05E11.4 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05E11.4a T05E11.4a 1278   IV: 11123159-11123567
CDS:T05E11.4b T05E11.4b 1137   IV: 11123159-11123567

1 Laboratories

Primary Identifier
WS

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037879

0 Strain