WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00099019 Genotype  DNC-1::GFP
Phenotype Remark  When Wnt and Src signaling were disrupted simultaneously by mom-5; src-1 double RNAi, dynactin(DNC-1)::GFP enrichment at the P2-EMS border was eliminated throughout the entire P2-EMS cell cycle and the P2 spindle failed to properly align in all embryos examined. Remark  (Figure 2D,E,G, Supp Movie 4) mom-5; src-1 double RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003397 mom-5 T23D8.1 Caenorhabditis elegans
WBGene00005077 src-1 Y92H12A.1 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12A.1a Y92H12A.1a 1602   I: 1567609-1567685
CDS:T23D8.1b T23D8.1b 1713   I: 9965641-9966113
CDS:T23D8.1a T23D8.1a 1707   I: 9965641-9966113
CDS:Y92H12A.1b Y92H12A.1b 1614   I: 1567609-1567685
CDS:Y92H12A.1c Y92H12A.1c 1434   I: 1570440-1570681
CDS:Y92H12A.1d Y92H12A.1d 678   I: 1577400-1577868

1 Laboratories

Primary Identifier
WH

2 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001107 spindle rotation defective early emb Rotation of the embryonic spindle is aberrant.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031420

0 Strain