WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084421 Genotype  rrf-3(pk1426)
Phenotype Remark  The lack of cell-cell contacts in nhr-25(RNAi) L2 worms affects the fate of the seam-cell anterior daughters but not the ability of V5.p to produce a postdeirid neuron.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003623 nhr-25 F11C1.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C1.6a F11C1.6a 1719   X: 13008892-13009008
CDS:F11C1.6b F11C1.6b 1479   X: 13009481-13009499

1 Laboratories

Primary Identifier
HL

2 Phenotype

Identifier Name Description
WBPhenotype:0000216 cell fate specification variant Any variation in the processes that govern acquisition of particular cell fates compared to control animals.
WBPhenotype:0000703 epithelial morphology variant Variations in the form, composition or structure of the layer of cells that cover the external surface of an organism and form the inner lining between the tissues and organs of that organism and the external environment compared to control. In C. elegans epithelial cells include epithelium of the alimentary tract, intestinal cells, hypodermis, interfacial cells and somatic gonad cells (Wormatlas).

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001510 neuronal cell fate specification variant Any variation in the processes that govern acquisition of neuronal cell fates compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024664

0 Strain