WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00027647 Remark  bacterial-feeding RNAi began at the L1 larval stage
Secondary Identifier  MV_SV:mv_AAA87552

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans

17 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4q F14D12.4q 1200   X: 5567754-5567829
CDS:F14D12.4k F14D12.4k 1002   X: 5573152-5573296
CDS:F14D12.4h F14D12.4h 1269   X: 5573152-5573296
CDS:F14D12.4m F14D12.4m 1323   X: 5573152-5573296
CDS:F14D12.4n F14D12.4n 1500   X: 5575969-5576190
CDS:F14D12.4e F14D12.4e 3720   X: 5575969-5576190
CDS:F14D12.4l F14D12.4l 978   X: 5579594-5579714
CDS:F14D12.4c F14D12.4c 954   X: 5582674-5582770
CDS:F14D12.4p F14D12.4p 1275   X: 5582674-5582770
CDS:F14D12.4g F14D12.4g 3495   X: 5582674-5582770
CDS:F14D12.4a F14D12.4a 1446   X: 5575969-5576190
CDS:F14D12.4b F14D12.4b 1179   X: 5575969-5576190
CDS:F14D12.4d F14D12.4d 3543   X: 5573152-5573296
CDS:F14D12.4f F14D12.4f 3519   X: 5579594-5579714
CDS:F14D12.4i F14D12.4i 1245   X: 5579594-5579714
CDS:F14D12.4j F14D12.4j 1221   X: 5582674-5582770
CDS:F14D12.4o F14D12.4o 1299   X: 5579594-5579714

2 Laboratories

Primary Identifier
MV
SV

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024497

0 Strain