WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F14D12.4q Sequence Name  F14D12.4q
Length (nt)  1200   Chromosome Location  X: 5567754-5567829
Chromosome . Primary Identifier  X Chromosome Location . Start  5567754
Chromosome Location . End  5567829
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4q

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52735 MEC-2, isoform q 43.3 399 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00044585
WBRNAi00013263
WBRNAi00027647

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F14D12.4q 5567754 5567829 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F14D12.4q 5567754 5567829 1
CDS:F14D12.4q 5582959 5583062 1
CDS:F14D12.4q 5583116 5583188 1
CDS:F14D12.4q 5583715 5583872 1
CDS:F14D12.4q 5583923 5584051 1
CDS:F14D12.4q 5584115 5584249 1
CDS:F14D12.4q 5584296 5584414 1
CDS:F14D12.4q 5584464 5584544 1
CDS:F14D12.4q 5586251 5586398 1
CDS:F14D12.4q 5586475 5586548 1
CDS:F14D12.4q 5587713 5587798 1
CDS:F14D12.4q 5590477 5590493 1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F14D12.4q.1 F14D12.4q.1 1200   X: 5567754-5590493