WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098866 Genotype  END-1::GFP
Phenotype Remark  mom-5 RNAi resulted in a failure of endoderm cells (marked by END-1::GFP expression) to properly gastrulate (internalize) during embryogenesis Remark  (Movie S1,S2) mom-5 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003397 mom-5 T23D8.1 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23D8.1b T23D8.1b 1713   I: 9965641-9966113
CDS:T23D8.1a T23D8.1a 1707   I: 9965641-9966113

1 Laboratories

Primary Identifier
LP

1 Phenotype

Identifier Name Description
WBPhenotype:0000047 gastrulation variant Variations in the process by which the germ layers become positioned in an embryo compared to control animals. Gastrulation involves the proper ingression of small groups of cells at various times into the blastocoel space.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000961 pattern of transgene expression variant Any variation in the cellular or subcellular pattern of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028736

0 Strain