WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00082780 Phenotype Remark  The life span was only slightly decreased and was mostly rescued by addition of trehalose.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000188 arl-3 F19H8.3 Caenorhabditis elegans
WBGene00006602 tps-1 ZK54.2 Caenorhabditis elegans
WBGene00006603 tps-2 F19H8.1 Caenorhabditis elegans
WBGene00008963 pugs-2 F19H8.2 Caenorhabditis elegans
WBGene00219907 F19H8.7 F19H8.7 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19H8.1a F19H8.1a 3690   II: 14600909-14601249
CDS:F19H8.2 F19H8.2 912   II: 14604206-14604514
CDS:ZK54.2a ZK54.2a 3996   X: 17467475-17467687
CDS:ZK54.2b ZK54.2b 3885   X: 17467475-17467687
CDS:F19H8.1b F19H8.1b 744   II: 14609299-14609448
CDS:F19H8.3 F19H8.3 555   II: 14607212-14607639

1 Laboratories

Primary Identifier
TM

2 Phenotype

Identifier Name Description
WBPhenotype:0001171 shortened life span The duration of viability in the adult phase of the life-cycle is less than that of control animals.
WBPhenotype:0001696 biosynthesis variant Animals exhibit variations in the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036280

1 Strain

WormBase ID
WBStrain00000001